T-COFFEE, Version_9.03.r1318 (2012-07-12 19:05:45 - Revision 1318 - Build 366)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=96
*
 BAD AVG GOOD
*
human        :  96
mouse        :  95
rat          :  96
chimpanzee   :  96
cow          :  92
opossum      :  92
sheep        :  95
dog          :  95
wild_boar    :  95
rabbit       :  96
cons         :  96

human            1 MA--NLGCWMLVLFVATWSDLGLCKK-RPKPG-GWNTG-GSRYPGQGSPGGNRYPPQGGGGWGQPHGGG   64 
mouse            1 MA--NLGYWLLALFVTMWTDVGLCKK-RPKPG-GWNTG-GSRYPGQGSPGGNRYPPQG-GTWGQPHGGG   63 
rat              1 MA--NLGYWLLALFVTTCTDVGLCKK-RPKPG-GWNTG-GSRYPGQGSPGGNRYPPQSGGTWGQPHGGG   64 
chimpanzee       1 MA--NLGCWMLVLFVATWSDLGLCKK-RPKPG-GWNTG-GSRYPGQGSPGGNRYPPQGGGGWGQPHGGG   64 
cow              1 MVKSHIGSWILVLFVAMWSDVGLCKK-RPKPGGGWNTG-GSRYPGQGSPGGNRYPPQGGGGWGQPHGGG   67 
opossum          1 MGKIHLGYWFLALFIMTWSDLTLCKKPKPRPGGGWNSG-GNRYPGQS--GGWGHPQGGGTNWGQPHAGG   66 
sheep            1 MVKSHIGSWILVLFVAMWSDVGLCKK-RPKPGGGWNTG-GSRYPGQGSPGGNRYPPQGGGGWGQPHGGG   67 
dog              1 MVKSHIGGWILLLFVATWSDVGLCKK-RPKPG-GWNTGGGSRYPGQGSPGGNRYPPQGGGGWGQPHGGG   67 
wild_boar        1 MVKSHIGGWILVLFVAAWSDIGLCKK-RPKPGGGWNTG-GSRYPGQGSPGGNRYPPQGGGGWGQPHGGG   67 
rabbit           1 MA--HLGYWMLLLFVATWSDVGLCKK-RPKPGGGWNTG-GSRYPGQSSPGGNRYPPQGGGGWGQPHGGG   65 

cons             1 *   ::* *:* **:   :*: **** :*:** ***:* *.*****.  **  :*  .   *****.**   69 


human           65 --WGQPHGG--GWGQPHGG--GWGQPHGG---------GWGQGGGTHSQWNKPSKPKTNMKHMAGAAAA  118 
mouse           64 --WGQPHGG--SWGQPHGG--SWGQPHGG---------GWGQGGGTHNQWNKPSKPKTNLKHVAGAAAA  117 
rat             65 --WGQPHGG--GWGQPHGG--GWGQPHGG---------GWSQGGGTHNQWNKPSKPKTNLKHVAGAAAA  118 
chimpanzee      65 --WGQPHGG--GWGQPHGG--GWGQPHGG---------GWGQGGGTHSQWNKPSKPKTNMKHMAGAAAA  118 
cow             68 --WGQPHGG--GWGQPHGG--GWGQPHGGGWGQPHGGGGWGQ-GGTHGQWNKPSKPKTNMKHVAGAAAA  129 
opossum         67 SNWGQPRPGGSNWGQPHPGGSNWGQPHPGG-------SNWGQAGSSYNQKWKPDKPKTNMKHVAGAAAA  128 
sheep           68 --WGQPHGG--GWGQPHGG--GWGQPHGG--------GGWGQ-GGSHSQWNKPSKPKTNMKHVAGAAAA  121 
dog             68 --WGQPHGG--GWGQPHGG--GWGQPHGG--------GGWGQGGGSHSQWGKPNKPKTNMKHVAGAAAA  122 
wild_boar       68 --WGQPHGG--GWGQPHGG--GWGQPHGG--------GGWGQGGGSHGQWNKPSKPKTNMKHVAGAAAA  122 
rabbit          66 --WGQPHGG--GWGQPHGG--GWGQPHGG---------GWGQGGGTHNQWGKPSKPKTSMKHVAGAAAA  119 

cons            70   ****: *  .***** *  .***** *         .*.* *.::.*  **.****.:**:******  138 


human          119 GAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYSNQNNFVHDCVNITIKQH  187 
mouse          118 GAVVGGLGGYMLGSAMSRPMIHFGNDWEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNITIKQH  186 
rat            119 GAVVGGLGGYMLGSAMSRPMLHFGNDWEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNITIKQH  187 
chimpanzee     119 GAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDQYSSQNNFVHDCVNITIKQH  187 
cow            130 GAVVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNITVKEH  198 
opossum        129 GAVVGGLGGYMLGSAMSRPIMHFGSDYEDRYYRENQYRYPNQVMYRPIDQYNNQNNFVHDCVNITVKQH  197 
sheep          122 GAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNITVKQH  190 
dog            123 GAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPEQVYYRPVDQYSNQNNFVRDCVNITVKQH  191 
wild_boar      123 GAVVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVDQYSNQNSFVHDCVNITVKQH  191 
rabbit         120 GAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNSFVHDCVNITVKQH  188 

cons           139 *******************::***.*:******** :***:** ***:*:*..**.**:******:*:*  207 


human          188 TVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ--RGSSMVLFSSPPVI-LLISFLIFLIV-  252 
mouse          187 TVTTTTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYDGRRSSSTVLFSSPPVI-LLISFLIFLIV-  253 
rat            188 TVTTTTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYD-GRRSSAVLFSSPPVI-LLISFLIFLIV-  253 
chimpanzee     188 TVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ--RGSSMVLFSSPPVI-LLISFLIFLIV-  252 
cow            199 TVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ--RGASVILFSSPPVI-LLISFLIFLIV-  263 
opossum        198 TTTTTTKGENFTETDIKIMERVVEQMCITQYQNEYRSAY------SVAFFSAPPVTLLLLSFLIFLIIP  260 
sheep          191 TVTTTTKGENFTETDIKIMERVVEQMCITQYQRESQAYYQ--RGASVILFSSPPVI-LLISFLIFLIV-  255 
dog            192 TVTTTTKGENFTETDMKIMERVVEQMCVTQYQKESEAYYQ--RGASAILFSPPPVI-LLISLLILLIV-  256 
wild_boar      192 TVTTTTKGENFTETDVKMIERVVEQMCITQYQKEYEAYAQ--RGASVILFSSPPVI-LLISFLLFLIV-  256 
rabbit         189 TVTTTTKGENFTETDIKIMERVVEQMCITQYQQESQAAYQ--RAAGVLLFSSPPVI-LLISFLIFLIV-  253 

cons           208 *.*************:*::********:***:.* .:        .  :**.***  **:*:*::**:   276 


human          253 -------GZ  254 
mouse          254 -------GZ  255 
rat            254 -------GZ  255 
chimpanzee     253 --------G  253 
cow            264 --------G  264 
opossum        261 DAHSVEAIS  269 
sheep          256 --------G  256 
dog            257 --------G  257 
wild_boar      257 --------G  257 
rabbit         254 --------G  254 

cons           277            285