T-COFFEE, Version_9.03.r1542 (2013-04-15 14:45:23 - Revision 1542 - Build 408)
Cedric Notredame
CPU TIME:0 sec.
SCORE=95
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BAD AVG GOOD
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human : 95
chimpanzee : 95
mouse : 94
rat : 95
Syrian_hamster : 95
bank_vole : 95
mule_deer : 95
elk : 95
cow : 90
opossum : 91
sheep : 95
goat : 95
dog : 94
wild : 95
rabbit : 95
platypus : 85
sperm_whale : 94
dolphin : 94
cons : 95
human 1 MA--NLGCWMLVLFVATWSD--LGLCKK-RPKPG-GW-NTG-GSRYPGQG-SPGGNRYPPQGGGGW 57
chimpanzee 1 MA--NLGCWMLVLFVATWSD--LGLCKK-RPKPG-GW-NTG-GSRYPGQG-SPGGNRYPPQGGGGW 57
mouse 1 MA--NLGYWLLALFVTMWTD--VGLCKK-RPKPG-GW-NTG-GSRYPGQG-SPGGNRYPPQG-GTW 56
rat 1 MA--NLGYWLLALFVTTCTD--VGLCKK-RPKPG-GW-NTG-GSRYPGQG-SPGGNRYPPQSGGTW 57
Syrian_hamster 1 -----------ALFVAMWTD--VGLCKK-RPKPG-GW-NTG-GSRYPGQG-SPGGNRYPPQGGGTW 48
bank_vole 1 --------------------------KK-RPKPG-GN-NTG-GSRYPGQG-SPGGNRYPPQGGGTW 35
mule_deer 1 MVKSHIGSWILVLFVAMWSX--VGLCKK-RPKPGGGW-NTG-GSRYPGQG-SPGGNRYPPQGGGGW 60
elk 1 MVKSHIGSWILVLFVAMWSD--VGLCKK-RPKPGGGW-NTG-GSRYPGQG-SPGGNRYPPQGGGGW 60
cow 1 MVKSHIGSWILVLFVAMWSD--VGLCKK-RPKPGGGW-NTG-GSRYPGQG-SPGGNRYPPQGGGGW 60
opossum 1 MGKIHLGYWFLALFIMTWSD--LTLCKKPKPRPGGGW-NSG-GNRYPGQS---GGWGHPQGGGTNW 59
sheep 1 MVKSHIGSWILVLFVAMWSD--VGLCKK-RPKPGGGW-NTG-GSRYPGQG-SPGGNRYPPQGGGGW 60
goat 1 MVKSHIGSWILVLFVAMWSD--VGLCKK-RPKPGGGW-NTG-GSRYPGQG-SPGGNRYPPQGGGGW 60
dog 1 MVKSHIGGWILLLFVATWSD--VGLCKK-RPKPG-GW-NTGGGSRYPGQG-SPGGNRYPPQGGGGW 60
wild 1 MVKSHIGGWILVLFVAAWSD--IGLCKK-RPKPGGGW-NTG-GSRYPGQG-SPGGNRYPPQGGGGW 60
rabbit 1 MA--HLGYWMLLLFVATWSD--VGLCKK-RPKPGGGW-NTG-GSRYPGQS-SPGGNRYPPQGGGGW 58
platypus 1 -------HWIIDICVVHLERRCRGHLHP-NPCPGGRCVQQQ-PNRYPGQPATPGGWGHPQGGGASW 57
sperm_whale 1 MVKSHIANWILVLFVATWSD--MGLCKK-RPKPGGGW-NTG-GSRYPGQG-SPGGNRYPPQGGGGW 60
dolphin 1 MVKSHIANWILVLFVATWSD--MGFCKK-RPKPGGGW-NTG-GSRYPGQG-SPGGNRYPPQGGGGW 60
cons 1 : .* ** : .***** ** :* . * 66
human 58 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GG--GWGQ--GGGTHSQWNK 101
chimpanzee 58 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GG--GWGQ--GGGTHSQWNK 101
mouse 57 GQPHGGG--WGQPHGG--S--WGQPHGG--S--WGQPH--------GG--GWGQ--GGGTHNQWNK 100
rat 58 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GG--GWSQ--GGGTHNQWNK 101
Syrian_hamster 49 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GG--GWGQ--GGGTHNQWNK 92
bank_vole 36 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GG--GWGQ--GGGTHNQWNK 79
mule_deer 61 GQPHXGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GGG-GWGQ--X-GTHSQWNK 104
elk 61 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GGG-GWGQ--G-GTHSQWNK 104
cow 61 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPHGGGWGQPHGGG-GWGQ--G-GTHGQWNK 112
opossum 60 GQPHAGGSNWGQPRPGGSN--WGQPHPGGSN--WGQPH--------PGGSNWGQ--AGSSYNQKWK 111
sheep 61 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GGG-GWGQ--G-GSHSQWNK 104
goat 61 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GGG-GWGQ--G-GSHSQWNK 104
dog 61 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GGG-GWGQ--GGGSHSQWGK 105
wild 61 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GGG-GWGQ--GGGSHGQWNK 105
rabbit 59 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GG--GWGQ--GGGTHNQWGK 102
platypus 58 GHPQGGGASWGHPQGG--GSNWGHPQGG--GASWGHPQ--------GG--GY---------SK-YK 99
sperm_whale 61 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GGG-GWGQPHGGGTHNQW-K 106
dolphin 61 GQPHGGG--WGQPHGG--G--WGQPHGG--G--WGQPH--------GGG-GWGQ--GGGTHNQW-K 104
cons 67 *:*: ** **:*: * . **:*: * . **:*: * .: .: * 132
human 102 PSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMD 167
chimpanzee 102 PSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMD 167
mouse 101 PSKPKTNLKHVAGAAAAGAVVGGLGGYMLGSAMSRPMIHFGNDWEDRYYRENMYRYPNQVYYRPVD 166
rat 102 PSKPKTNLKHVAGAAAAGAVVGGLGGYMLGSAMSRPMLHFGNDWEDRYYRENMYRYPNQVYYRPVD 167
Syrian_hamster 93 PSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPMMHFGNDWEDRYYRENMNRYPNQVYYRPVD 158
bank_vole 80 PSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPMIHFGNDWEDRYYRENMNRYPNQVYYRPVD 145
mule_deer 105 PSKPKTNMKHVXGAAAAGAVVGGLGGYMLGSAMXRPLIHFGNDYEDXYYRENMYRYPNQVYYRPVD 170
elk 105 PSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVD 170
cow 113 PSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVD 178
opossum 112 PDKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPIMHFGSDYEDRYYRENQYRYPNQVMYRPID 177
sheep 105 PSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVD 170
goat 105 PSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIRFGNDYEDRYYRENMYRYPNQVYYRPVD 170
dog 106 PNKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPEQVYYRPVD 171
wild 106 PSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVD 171
rabbit 103 PSKPKTSMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVD 168
platypus 100 PDKPKTGMKHVAGAAAAGAVVGGLGGYMIGSAMSRPPMHFGNEFEDRYYRENQNRYPNQVYYRPVD 165
sperm_whale 107 PSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVD 172
dolphin 105 PSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVD 170
cons 133 *.****.:**: ****************:**** ** ::**.::** ***** ***:** ***:* 198
human 168 EYSNQNNFVHDCVNITIKQHTVTT-TTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ--RGS 230
chimpanzee 168 QYSSQNNFVHDCVNITIKQHTVTT-TTKGENFTETDVKMMERVVEQMCITQYERESQAYYQ--RGS 230
mouse 167 QYSNQNNFVHDCVNITIKQHTVTT-TTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYDGRRSS 231
rat 168 QYSNQNNFVHDCVNITIKQHTVTT-TTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYD-GRRS 231
Syrian_hamster 159 QYNNQNNFVHDCVNITIKQHTVTT-TTKGENFTETDIKIMERVVEQMCTTQYQKESQAYYD-GRRS 222
bank_vole 146 QYNNQNNFVHDCVNITIKQHTVTT-TTKGENFTETDVKMMERVVEQMCVTQYQKESQAYYE--GRS 208
mule_deer 171 QYNNQNTFVHDCVNITVKQHTVTT-TTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ--RGA 233
elk 171 QYNNQNTFVHDCVNITVKQHTVTT-TTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQ--RGA 233
cow 179 QYSNQNNFVHDCVNITVKEHTVTT-TTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQ--RGA 241
opossum 178 QYNNQNNFVHDCVNITVKQHTTTT-TTKGENFTETDIKIMERVVEQMCITQYQNEYRSAY------ 236
sheep 171 QYSNQNNFVHDCVNITVKQHTVTT-TTKGENFTETDIKIMERVVEQMCITQYQRESQAYYQ--RGA 233
goat 171 QYSNQNNFVHDCVNITVKQHTVTT-TTKGENFTETDIKIMERVVEQMCITQYQRESQAYYQ--RGA 233
dog 172 QYSNQNNFVRDCVNITVKQHTVTT-TTKGENFTETDMKIMERVVEQMCVTQYQKESEAYYQ--RGA 234
wild 172 QYSNQNSFVHDCVNITVKQHTVTT-TTKGENFTETDVKMIERVVEQMCITQYQKEYEAYAQ--RGA 234
rabbit 169 QYSNQNSFVHDCVNITVKQHTVTT-TTKGENFTETDIKIMERVVEQMCITQYQQESQAAYQ--RAA 231
platypus 166 QYGSQDGFVRDCVNITVTQHTVTT--TEGKNLNETDVKIMTRVLEQMCVNL--------------- 214
sperm_whale 173 QYNNQNSFVHDCVNITVKQHTVTTTTTKGENFTETDIKMMERVVEQMCITQYQREYQAYYQ--RGA 236
dolphin 171 QYNNQNSFVHDCVNITVKQHTVTTTTTKGENFTETDIKMMERVVEQMCITQYQREYEAYYQ--RGA 234
cons 199 :*..*: **:******:.:**.** *:*:*:.***:*:: **:**** . 264
human 231 SMVLFSSPPVI-LLISFLIFLIV--------GZ 254
chimpanzee 231 SMVLFSSPPVI-LLISFLIFLIV---------G 253
mouse 232 STVLFSSPPVI-LLISFLIFLIV--------GZ 255
rat 232 SAVLFSSPPVI-LLISFLIFLIV--------GZ 255
Syrian_hamster 223 SAVLFSSPPVI-LLISFLIFLIV---------G 245
bank_vole 209 --------------------------------S 209
mule_deer 234 SVILFSSPPVI-LLISFLIFLIV---------G 256
elk 234 SVILFSSPPVI-LLISFLIFLIV---------G 256
cow 242 SVILFSSPPVI-LLISFLIFLIV---------G 264
opossum 237 SVAFFSAPPVTLLLLSFLIFLIIPDAHSVEAIS 269
sheep 234 SVILFSSPPVI-LLISFLIFLIV---------G 256
goat 234 SVILFSSPPVI-LLISFLIFLIV---------G 256
dog 235 SAILFSPPPVI-LLISLLILLIV---------G 257
wild 235 SVILFSSPPVI-LLISFLLFLIV---------G 257
rabbit 232 GVLLFSSPPVI-LLISFLIFLIV---------G 254
platypus 215 --------------------------------Y 215
sperm_whale 237 SVILFSSPPVT-LLI-----------------S 251
dolphin 235 SVILFSSPPVI-LLISFLIFLIV---------G 257
cons 265 297